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Figtree is a program for viewing trees, including summary information produced by treeannotator, and producing publication quality figures. We have also created packages for each of the. Click copy and open the link in a new browser tab/window

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To summarise bayes factor support for rates, select the discrete rates tab Installing beast beast has been developed in java, which allows the same code to run on any platform that has the java software installed Load the output beast file containing the spatial rates and.

To inform beauti/beast about the sampling dates of the sequences, go to the tips menu and select the “use tip dates” option

By default all the taxa are assumed to have a date of zero (i.e. Running beast for the first time this tutorial will guide you through running beast and some of its accessory programs to do a simple phylogenetic analysis If you haven’t already, download and. Tracer (now at version 1.7.2) is a software package for visualising and analysing the mcmc trace files generated through bayesian phylogenetic inference